Mats Rudemo

Professor

Director Stochastic Centre, Gothenburg

Teaching

Statistical Image Analysis


Research interests

Microarrays, 2D electrophoresis, image analysis, spatial statistics, particle tracking, precision forestry, statistics in biology and engineering.

Selected papers in reverse chronological order

• Nisslert R, Kvarnström M, Lorén N, Nydén M & Rudemo M (2006) Identification of the three-dimensional gel microstructure from transmission electron micrographs. To appear in Journal of Microscopy.
• Jernås M, Palming J, Sjöholm K, Jennische E, Svensson P-A, Gabrielsson BG, Levin M, Sjögren A, Rudemo M, Lystig TC, Carlsson B, Carlsson LMS, Lönn M (2006) Separation of human adipocytes by size - hypertrophic fat cells display distinct gene expression. To appear in FASEB Journal.
• Kristiansson E, Sjögren A, Rudemo M & Nerman O (2006) Quality optimised analysis of general paired microarray experiments. Statistical Applications in Genetics and Molecular Biology 4, No.1, Article 30.
• Kristiansson E, Sjögren A, Rudemo M & Nerman O (2005) Weighted analysis of paired microarray experiments. Statistical Applications in Genetics and Molecular Biology 4, No.1, Article 30.
• Gabrielsson BG, Olofsson LE, Sjögren A, Jernås M, Elander A, Lönn M, Rudemo M & Carlsson LMS (2005) Evaluation of reference genes for studies of gene expression in human adipose tissue. Obesity Research 13 649-652.
• Ekstrøm CT, Bak S & Rudemo M (2005) Pixel-level signal modelling with spatial correlation for two-colour microarrays. Statistical Applications in Genetics and Molecular Biology 4, No.1, Article 6.
• Ekstrøm CT, Bak S, Kristensen C & Rudemo M (2004) Spot shape modelling and data transformation for microarrays. Bioinformatics 20, 2270-2278.
• Joossens E, Fagerlund J, Johansson S, de Maré J & Rudemo M (2004) Statistical analysis of ultrasonic reflections from inclusions in steel. Manuscript.
• Benson M, Olsson M, Rudemo M, Wennergren G & Cardell LO (2004) Pros and cons of microarray technology in allergy research. Clinical and Experimental Allergy 34, 1001-1006.
• Gustafsson, J.S., Caesar, R., Glasbey, C.A., Blomberg, A. & Rudemo, M. (2004) Statistical exploration of variation in quantitative two-dimensional gel electrophoresis data. Proteomics 4, 3791-3799.
• Larsen, M. & Rudemo, M. (2004) Approximate Bayesian estimation of a 3D point pattern from multiple views. Pattern Recognition Letters 25, 1359-1368.
• Benson M, Svensson PA, Adner M, Carén H, Carlsson B, Carlsson LMS, Martinsson T, Rudemo M & Cardell LO (2004) DNA microarray analysis of chromosomal susceptibility regions to identify candidate genes for allergic disease: a pilot study. Acta Oto-Laryngologica 124, 813-819.
• Benson M, Carlsson LMS, Adner M, Jernås M, Rudemo M, Sjögren A, Svensson PA, Uddman R and Cardell LO (2004) Gene profiling reveals increased expression of uteroglobin and other anti-inflammatory genes in glucocorticoid-treated nasal polyps. Journal of Allergy and Clinical Immunology 113, 1137-1143.
• Månsson, M. & Rudemo, M. (2002) Random patterns of non-overlapping convex grains. Adv. Appl. Probability 34, 718-738. (Report 2001:53, Mathematical Statistics, Chalmers University of Technology. Gzipped PS).
• Gustafsson, J.S., Blomberg, A. & Rudemo, M. (2001) Warping two-dimensional electrophoresis gel images to correct for geometric distortions of the spot pattern. Electrophoresis 23, 1731-1744. (Report 2001:73, Mathematical Statistics, Chalmers University of Technology. Gzipped PS).
• Lund, J. & Rudemo, M. (2000) Models for point processes observed with noise. Biometrika 87, 235-249.
• Larsen, M. & Rudemo, M. (1998) Optimizing templates for finding trees in aerial photographs. Pattern Recognition Letters 19, 1153-1162.
• Christensen, J. & Rudemo, M., (1998) Multiple change-point analysis applied to the monitoring of salmonella prevalence in Danish pigs and pork. Preventive Veterinary Medicine 36, 131-143.
• Dralle, K. & Rudemo, M. (1997) Automatic estimation of individual tree positions from aerial photos. Canadian J. Forest Research 27, 1728-1736.
• Andreasen, C., Rudemo, M. & Sevestre, S. (1997) Assessment of weed density at an early stage by use of image processing. Weed Research 37, 5-18.
• Dralle, K. & Rudemo, M. (1996) Stem number estimation by kernel smoothing of aerial photos. Canadian J. Forest Research 26, 1228-1236.
• Christensen, J. & Rudemo, M., (1996) Multiple change-point analysis of disease incidence rates. Preventive Veterinary Medicine 26, 53-76.

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